RU | profile

faruqe@ru.ac.bd, faruqe.cse@gmail.com

Dept. of Computer Science and Engineering, M. A. Wazed Miah Academic Building, University of Rajshahi, Rajshahi - 6205, Bangladesh

MD. OMAR FARUQE
ASSOCIATE PROFESSOR
Computer Science & Engineering

Education Summary: M.Sc. in Computer Science and Engineering (RU)
Research Interest: Bioinformatics, Artificial Intelligence, Machine Learning, Deep Learning, Data Science

Level	Institution	Year
Masters (M.Sc. in Computer Science in Engineering (RU))	Rajshahi University	2006
Bachelor/Honors (B.Sc. in Computer Science and Engineering)	Rajshahi University	2005
Higher Secondary (HSC)	Govt Azizul Haque College, Bogura	2001
Secondary (SSC)	Khatiamari High School, Dhunat, Bogura	1999

Experience in Rajshahi University

Duration	Organization/Institute	Position
2022-09-14 to	Computer Science & Engineering	Associate Professor
2012-12-13 to 2022-09-13	Computer Science & Engineering	Assistant Professor
2010-04-01 to 2011-12-12	Computer Science & Engineering	LECTURER

Experience in other Organization/Institute

Duration	Organization/Institute	Position
2008-09-01 to 2010-03-31	Dept. of Computer Science & Engineering, BRAC University, Dhaka	Lecturer

Journal

1.	Arnob Sarker, Abu Tayab Moin, Md. Mahmudur Rahman, Chadni Khatun, Chandan Barai, Narayan Roy, Md. Abdul Aziz, Md. Omar Faruqe, Md. Tofazzal Hossain "In Silico design of a multi-epitope vaccine for Human Parechovirus: Integrating immunoinformatics and computational techniques" PLOS ONE Published: December 2024 External Link
2.	Md. Wasim Alom, Md. Delowar Kobir Jibon, Md. Omar Faruqe, Md. Siddikur Rahman, Farzana Akter, Aslam Ali, Md Motiur Rahman "Integrated Gene Expression Data-Driven Identification of Molecular Signatures, Prognostic Biomarkers, and Drug Targets for Glioblastoma" BioMed Research International, 2024, 6810200, 22 pages, 2024 Published: August 2024 External Link
3.	M.E. Hosen; M.S. Rahman; M.F. Priota; M.Z. Hasan; M. Rahman; A.K. Parvez; Md Omar Faruqe, Acharje; M. Khalekuzzaman; M.A. Islam et al. "Evaluation of biological activities of Camellia sinensis and in silico approach against Rgg2 protein of Streptococcus dysgalactiae" Arabian Journal of Medicinal and Aromatic Plants Published: August 2024 External Link
4.	Md. Ahad Ali, Humaira Sheikh, Muhammad Yaseen, Md Omar Faruqe, Ihsan Ullah, Neeraj Kumar, Mashooq Ahmad Bhat, Md. Nurul Haque Mollah "Exploring the Therapeutic Potential of Petiveria alliacea L. Phytochemicals: A Computational Study on Inhibiting SARS-CoV-2’s Main Protease (Mpro)" Molecules 2024, 29(11), 2524; Special Issue: Molecular Docking in Drug Design and Development Published: May 2024 External Link
5.	Alomgir Hossain, Md Ekhtiar Rahman, Md Omar Faruqe, Ahmed Saif, Suzzada Suhi, Rashed Zaman, Abdurahman Hajinur Hirad, Mohammad Nurul Matin, Muhammad Fazle Rabbee, andKwang-Hyun Baek "Characterization of Plant-Derived Natural Inhibitors of Dipeptidyl Peptidase-4 as Potential Antidiabetic Agents: A Computational Study" Pharmaceutics, Volume 16, Issue 4 Published: April 2024 External Link
6.	Showna Hossain; Rafat Hossain Rafi; Farhana Alam Ripa; Md. Rafiqul Islam Khan; Md. Eram Hosen; Md. Khademul Islam Molla; Md. Omar Faruqe; Md. Abdul Alim Al-Bari; Somlal Das "Modulating the antibacterial effect of the existing antibiotics along with repurposing drug metformin" Archives of Microbiology, Volume 206, article number 190, (2024) Published: March 2024 External Link
7.	Rahman, Md Sojiur; Hosen, Md Eram; Faruqe, Md Omar; Islam, Md Asadul; Acharjee, Uzzal Kumar; Gaafar, Abdel-Rhman; Nafidi, Hiba-Allah; Mekonnen, Amare; Bourhia, Mohammed; Zaman, Rashed "Adenanthera pavonina-derived compounds to identify potential activators of mutated insulin receptor tyrosine kinase from diabetes mellitus: insight into the phytochemical analysis and in silico assays" Frontiers in Molecular Biosciences (Sec. Biological Modeling and Simulation), Volume 10 - 2023 \| doi: 10.3389/fmolb.2023.1278701 Published: March 2024 External Link
8.	Md. Eram Hosen, Sumaiya Jahan Supti, Shopnil Akash, Md. Ekhtiar Rahman, Md Omar Faruqe, M. Manirujjaman, Uzzal Kumar Acharjee, Abdel-Rhman Z. Gaafar, Lahcen Ouahmane, Baye Sitotaw, Mohammed Bourhia, Rashed Zaman "Mechanistic insight of Staphylococcus aureus associated skin cancer in humans by Santalum album derived phytochemicals: an extensive computational and experimental approaches" Frontiers in Chemistry, Sec. Medicinal and Pharmaceutical Chemistry, Volume 11 - 2023 Published: November 2023 External Link
9.	Md. Murshid Alom ,Rejwana Parvin Bonna, Ariful Islam ,Md. Wasim Alom, Md. Ekhtiar Rahman, Md Omar Faruqe, Md. Khalekuzzaman ,Rashed Zaman ,and Md. Asadul Islam "Unveiling Neuroprotective Potential of Spice Plant-Derived Compounds against Alzheimer’s Disease: Insights from Computational Studies" International Journal of Alzheimer's Disease Published: September 2023 External Link
10.	Md. Murshid Alom, Md Omar Faruqe, Md. Khademul Islam Molla, Md Motiur Rahman "Exploring Prognostic Biomarkers of Acute Myeloid Leukemia to Determine Its Most Effective Drugs from the FDA-Approved List through Molecular Docking and Dynamic Simulation" BioMed Research International Published: June 2023 External Link
11.	Md. Eram Hosen, Md. Sojiur Rahman, Md Omar Faruqe, Md. Khalekuzzaman, Md. Asadul Islam, Uzzal Kumar Acharjee, Rashed Zaman "Molecular docking and dynamics simulation approach of Camellia sinensis leaf extract derived compounds as potential cholinesterase inhibitors" In Silico Pharmacology Published: May 2023 External Link
12.	Alomgir Hossain; Md Ekhtiar Rahman; Md Siddiqur Rahman; Khondokar Nasirujjaman; Mohammad Nurul Matin; Md Omar Faruqe; Muhammad Fazle Rabbee "Identification of medicinal plant-based phytochemicals as a potential inhibitor for SARS-CoV-2 main protease (Mpro) using molecular docking and deep learning methods" Computers in Biology and Medicine Published: March 2023 External Link
13.	Md. Ariful Islam; Md. Bayazid Hossen; Md. Abu Horaira; Md. Alim Hossen; Md. Kaderi Kibria; Md. Selim Reza; Khanis Farhana Tuly; Md. Omar Faruqe; Firoz Kabir; Rashidul Alam Mahumud et al. "Exploring Core Genes by Comparative Transcriptomics Analysis for Early Diagnosis, Prognosis, and Therapies of Colorectal Cancer" Cancers Published: February 2023 External Link
14.	Md Bayazid Hossen; Md Ariful Islam; Md Selim Reza; Md Kaderi Kibria; Md Abu Horaira; Khanis Farhana Tuly; Md Omar Faruqe; Firoz Kabir; Md Nurul Haque Mollah "Robust identification of common genomic biomarkers from multiple gene expression profiles for the prognosis, diagnosis, and therapies of pancreatic cancer" Computers in Biology and Medicine Published: January 2023 External Link
15.	Utpala Nanda Chowdhury, Md Omar Faruqe, Md Mehedy, Shamim Ahmad, M Babul Islam, Watshara Shoombuatong, AKM Azad, Mohammad Ali Moni "Effects of Bacille Calmette Guerin (BCG) vaccination during COVID-19 infection" Computers in Biology and Medicine, Volume: 138, Pages: 104891, Publisher: Pergamon Published: November 2021 External Link

Report

1.	Md. Omar Faruqe, Md. Sagar Rana "Smart Banking Chatbot With Examples & Use Cases" https://www.revechat.com/banking-chatbot/ Published: March 2023 External Link

CSE1221: Object Oriented Programming (Java) Java Programming Download Resource
CSE2142: Writing Professional Code Lab Git/GitHub, Professional Code Running Download Resource
CSE3162 Mobile Application Development Lab Mobile Application Development Lab with Flutter Running Download Resource
CSE T262 Software Project Management Software Project Management Running Download Resource
CSE151 Web Engineering Web Application Development with Python and Django
AIS106: Computer in Business AIS106: Computer in Business Department of Accounting and Information Systems University of Rajshahi
CSE413: Artificial Intelligence Artificial Intelligence with Python Running Download Resource

Membership

ISCB (International Society for Computational Biology & Bioinformatics)
ABACBS (The Australian Bioinformatics and Computational Biology Society Inc)
PMI Montreal Chapter
PMI Bangladesh Chapter

Not Available